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Intron Name: Anas_platyrhynchos_platyrhynchos_7_15199716_15200265_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15199716 - 15200265

Intron Length:

550

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAATGGC

5'SS Class:

strong_major

3'SS Sequence:

TCTTTCCTTTTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGTTCAT

U12 Branch Point Sequence:

TCATCCAGATGT

Flanking Amino Acid:

GKVKLVLKHNRYFVESTHPD

Intron Amino Acid Position:

187

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.8

0.82

0.9

36.9

Major BPS

0.65

1.1

77.4

37.3

Major PPT

86.6

0.82

0.6

85.4

Minor 5ss

32.4

-2

3.3

43.9

Minor BPS

43.2

-0.4

2.2

62.68

46.7

Associated Gene:

Gene:

ERCC3

Ensembl Gene ID:

ENSAPLG00000012068

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012566

15174356 - 15220522

46167