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Intron Name: Anas_platyrhynchos_platyrhynchos_7_15229316_15233220_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15229316 - 15233220

Intron Length:

3905

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACAGCCG

5'SS Class:

major

3'SS Sequence:

GGTGATATTGTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAGTAAT

U12 Branch Point Sequence:

AATACTTTACTT

Flanking Amino Acid:

DGFGRIHEIQQKHTQEYGKI

Intron Amino Acid Position:

114

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

67.4

0.41

1.1

51.4

45.2

Major BPS

76.6

0.66

1.1

75.9

36.3

Major PPT

63.4

0.3

55.6

44.3

Minor 5ss

29.4

-2.4

3.4

39.4

Minor BPS

57.6

0.32

1.6

72.07

39.2

Associated Gene:

Gene:

CYP27C1

Ensembl Gene ID:

ENSAPLG00000012186

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012710

15228507 - 15244804

16298