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Intron Name: Anas_platyrhynchos_platyrhynchos_7_15235212_15236573_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15235212 - 15236573

Intron Length:

1362

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGTCTG

5'SS Class:

strong_major

3'SS Sequence:

CTCGTATGTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTGAT

U12 Branch Point Sequence:

AATTCTTTGATC

Flanking Amino Acid:

NNLFFKYSMEGVATILYECR

Intron Amino Acid Position:

244

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.9

0.82

72.7

44.5

Major BPS

0.85

0.9

39.9

Major PPT

70.9

0.47

65.1

40.3

Minor 5ss

36.4

-1.5

3.3

47.2

Minor BPS

70.6

0.63

1.1

72.38

32.4

Associated Gene:

Gene:

CYP27C1

Ensembl Gene ID:

ENSAPLG00000012186

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012710

15228507 - 15244804

16298