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Intron Name: Anas_platyrhynchos_platyrhynchos_7_15236784_15238262_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

15236784 - 15238262

Intron Length:

1479

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTA|GTAAGATTT

5'SS Class:

major

3'SS Sequence:

TTGAATCCCAAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTTGAA

U12 Branch Point Sequence:

TTTTTTTGAATC

Flanking Amino Acid:

CRSWDGLFKFSQIHVDNKLK

Intron Amino Acid Position:

314

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.2

0.62

77.1

32.1

Major BPS

87.2

0.92

0.8

77.7

37.1

Major PPT

57.6

0.17

1.1

56.5

38.8

Minor 5ss

45.7

-0.4

3.1

67.1

38.9

Minor BPS

69.9

0.6

1.3

78.42

30.8

Associated Gene:

Gene:

CYP27C1

Ensembl Gene ID:

ENSAPLG00000012186

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012710

15228507 - 15244804

16298