Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_7_15322434_15330255_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15322434 - 15330255

Intron Length:

7822

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTAAC

5'SS Class:

strong_major

3'SS Sequence:

CCCCTTCCTTCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCTC

U12 Branch Point Sequence:

TCTCTCTTTTCT

Flanking Amino Acid:

GNAFPIKAQPSDSTPAKANK

Intron Amino Acid Position:

255

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.1

1.02

0.7

86.6

22.3

Major BPS

35.6

-0.9

4.2

77.4

37.4

Major PPT

79.1

0.66

0.7

76.2

25.9

Minor 5ss

30.6

-2.2

2.6

35.8

41.1

Minor BPS

42.3

-0.5

3.6

72.84

Associated Gene:

Gene:

BIN1

Ensembl Gene ID:

ENSAPLG00000012452

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033997

15262888 - 15349189

86302

ENSAPLT00000030635

15263272 - 15348542

85271