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Intron Name: Anas_platyrhynchos_platyrhynchos_7_15343856_15344489_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15343856 - 15344489

Intron Length:

634

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGTGCA

5'SS Class:

strong_major

3'SS Sequence:

CCTTTCTCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTAACAA

U12 Branch Point Sequence:

GTGTTAACAAGC

Flanking Amino Acid:

ADMPPGFLFKVQAMHDYTAT

Intron Amino Acid Position:

463

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.3

0.97

0.7

80.2

27.1

Major BPS

61.8

0.29

1.1

69.7

35.6

Major PPT

85.7

0.8

0.7

80.5

24.8

Minor 5ss

27.5

-2.6

32.5

42.3

Minor BPS

39.1

-0.8

2.1

49.21

40.6

Associated Gene:

Gene:

BIN1

Ensembl Gene ID:

ENSAPLG00000012452

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030635

15263272 - 15348542

85271

ENSAPLT00000013045

15263272 - 15349189

85918

ENSAPLT00000045906

15262888 - 15349189

86302

ENSAPLT00000042182

15263272 - 15349189

85918

ENSAPLT00000033997

15262888 - 15349189

86302