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Intron Name: Anas_platyrhynchos_platyrhynchos_7_1534463_1534948_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1534463 - 1534948

Intron Length:

486

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGTAG

5'SS Class:

strong_major

3'SS Sequence:

TTTCTTGTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTAAT

U12 Branch Point Sequence:

TGGGTACTAATA

Flanking Amino Acid:

IKQAVFCYTKALKYDPTNVR

Intron Amino Acid Position:

238

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.3

0.93

0.9

75.6

36.7

Major BPS

86.7

0.91

0.7

84.2

21.8

Major PPT

88.6

0.87

0.8

84.2

30.7

Minor 5ss

36.1

-1.6

3.3

45.9

49.3

Minor BPS

43.9

-0.4

1.9

53.3

39.2

Associated Gene:

Gene:

GTF3C3

Ensembl Gene ID:

ENSAPLG00000016020

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016753

1527231 - 1551604

24374