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Intron Name: Anas_platyrhynchos_platyrhynchos_7_1535115_1536208_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1535115 - 1536208

Intron Length:

1094

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTTGG

5'SS Class:

strong_major

3'SS Sequence:

CTGCATTTTATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCTGAA

U12 Branch Point Sequence:

AAATGCTTAATG

Flanking Amino Acid:

RFMQLARDMAKSYYEANDVT

Intron Amino Acid Position:

293

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.8

0.8

0.9

72.5

39.9

Major BPS

73.3

0.58

0.9

63.4

35.6

Major PPT

74.3

0.55

0.9

68.4

37.1

Minor 5ss

41.3

-1

2.8

49.6

Minor BPS

57.8

0.11

1.8

59.95

41.9

Associated Gene:

Gene:

GTF3C3

Ensembl Gene ID:

ENSAPLG00000016020

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016753

1527231 - 1551604

24374