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Intron Name: Anas_platyrhynchos_platyrhynchos_7_1536357_1538128_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1536357 - 1538128

Intron Length:

1772

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTATGGAAA

5'SS Class:

major

3'SS Sequence:

TTTTCTGTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

AAATCTTTAGAA

Flanking Amino Acid:

SSKQYDKALAVITDFAGIVL

Intron Amino Acid Position:

343

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.2

0.57

67.9

38.6

Major BPS

90.4

0.7

90.2

19.3

Major PPT

85.8

0.8

0.7

85.1

29.7

Minor 5ss

38.1

-1.3

3.1

48.4

47.6

Minor BPS

53.4

0.1

1.6

61.54

37.9

Associated Gene:

Gene:

GTF3C3

Ensembl Gene ID:

ENSAPLG00000016020

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016753

1527231 - 1551604

24374