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Intron Name: Anas_platyrhynchos_platyrhynchos_7_1538202_1539244_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1538202 - 1539244

Intron Length:

1043

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTAGT

5'SS Class:

strong_major

3'SS Sequence:

GTTTCTGTTTAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTCAG

U12 Branch Point Sequence:

TTTCTGTTTAAG

Flanking Amino Acid:

SEKCPTEEKKEDTASVVETQ

Intron Amino Acid Position:

367

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

97.3

1.11

0.7

90.9

28.7

Major BPS

63.2

0.33

1.5

71.6

36.4

Major PPT

71.9

0.49

1.1

75.4

38.6

Minor 5ss

37.5

-1.4

2.8

51.6

44.9

Minor BPS

43.8

-0.6

2.4

57.61

43.6

Associated Gene:

Gene:

GTF3C3

Ensembl Gene ID:

ENSAPLG00000016020

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016753

1527231 - 1551604

24374