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Intron Name: Anas_platyrhynchos_platyrhynchos_7_15387276_15387852_F

Intron Information:

Intron Rank:

125418

Intron Class:

major

Intron Phase:

Intron Coordinates:

15387276 - 15387852

Intron Length:

577

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTA|GTAAGTGTT

5'SS Class:

strong_major

3'SS Sequence:

TGCTTCATTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCTTCAT

U12 Branch Point Sequence:

TGTTGCTTCATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.72

0.9

80.7

31.6

Major BPS

69.6

0.49

1.3

73.6

41.8

Major PPT

79.9

0.67

0.9

73.8

35.4

Minor 5ss

40.5

-1.1

3.4

59.8

Minor BPS

57.4

0.31

2.2

80.32

42.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017579

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036483

15386486 - 15393641

7156

ENSAPLT00000017912

15386486 - 15398258

11773