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Intron Name: Anas_platyrhynchos_platyrhynchos_7_1539338_1540409_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1539338 - 1540409

Intron Length:

1072

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTAAT

5'SS Class:

strong_major

3'SS Sequence:

TGTCTTCTCACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTAAAAC

U12 Branch Point Sequence:

TGTCTTCTCACA

Flanking Amino Acid:

SHPAAESSTAAVEKVSCCIP

Intron Amino Acid Position:

398

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

98.8

1.15

0.6

96.1

12.1

Major BPS

60.7

0.27

1.1

67.6

34.6

Major PPT

81.6

0.71

0.8

76.1

32.6

Minor 5ss

37.4

-1.4

2.8

50.6

45.9

Minor BPS

-0.3

61.67

38.4

Associated Gene:

Gene:

GTF3C3

Ensembl Gene ID:

ENSAPLG00000016020

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016753

1527231 - 1551604

24374