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Intron Name: Anas_platyrhynchos_platyrhynchos_7_1541247_1541700_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1541247 - 1541700

Intron Length:

454

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGAAGA

5'SS Class:

strong_major

3'SS Sequence:

ATGCTCTATTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTTAT

U12 Branch Point Sequence:

TGCCATTTAAGT

Flanking Amino Acid:

NLAVVWLRHAECLKALGHME

Intron Amino Acid Position:

490

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.1

0.87

0.8

76.9

33.7

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

69.2

0.43

0.9

67.2

38.9

Minor 5ss

27.4

-2.6

2.7

31.6

42.2

Minor BPS

49.6

0.05

1.8

66.9

43.7

Associated Gene:

Gene:

GTF3C3

Ensembl Gene ID:

ENSAPLG00000016020

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016753

1527231 - 1551604

24374