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Intron Name: Anas_platyrhynchos_platyrhynchos_7_1541904_1542511_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

1541904 - 1542511

Intron Length:

608

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTAAG

5'SS Class:

strong_major

3'SS Sequence:

CAATAACATCTAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TGTTCAA

U12 Branch Point Sequence:

TGTTCAATAACA

Flanking Amino Acid:

LAQDANAAQQELKLLLHRST

Intron Amino Acid Position:

558

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.1

0.99

0.7

83.1

30.9

Major BPS

75.6

0.64

1.1

77.7

37.1

Major PPT

55.5

0.12

45.2

41.1

Minor 5ss

29.6

-2.3

2.6

32.5

42.4

Minor BPS

63.4

0.42

1.9

79.03

36.4

Associated Gene:

Gene:

GTF3C3

Ensembl Gene ID:

ENSAPLG00000016020

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016753

1527231 - 1551604

24374