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Intron Name: Anas_platyrhynchos_platyrhynchos_7_1542614_1543331_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1542614 - 1543331

Intron Length:

718

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGCCAG

5'SS Class:

strong_major

3'SS Sequence:

AATTTGTTTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTAAT

U12 Branch Point Sequence:

CTGCCCTTAAAT

Flanking Amino Acid:

LLTMLAMLLKVAMSRAQVCL

Intron Amino Acid Position:

592

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.9

0.87

0.9

68.8

43.8

Major BPS

84.4

0.85

34.5

Major PPT

75.3

0.57

0.9

66.6

44.2

Minor 5ss

37.2

-1.4

46.7

48.6

Minor BPS

69.3

0.68

1.5

78.84

42.9

Associated Gene:

Gene:

GTF3C3

Ensembl Gene ID:

ENSAPLG00000016020

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016753

1527231 - 1551604

24374