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Intron Name: Anas_platyrhynchos_platyrhynchos_7_1545974_1548438_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1545974 - 1548438

Intron Length:

2465

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACGTTAG

5'SS Class:

strong_major

3'SS Sequence:

GGTATGTGTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTAAT

U12 Branch Point Sequence:

ACATTCACAATG

Flanking Amino Acid:

VLKRHALLVQGFSFLFRYLD

Intron Amino Acid Position:

822

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.9

0.85

0.9

75.1

37.7

Major BPS

0.92

0.9

86.2

29.1

Major PPT

64.8

0.33

1.1

56.9

47.5

Minor 5ss

38.5

-1.3

48.8

47.4

Minor BPS

45.2

-0.5

1.8

47.43

39.9

Associated Gene:

Gene:

GTF3C3

Ensembl Gene ID:

ENSAPLG00000016020

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016753

1527231 - 1551604

24374