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Intron Name: Anas_platyrhynchos_platyrhynchos_7_15485197_15486316_F

Intron Information:

Intron Rank:

148339

Intron Class:

major

Intron Phase:

Intron Coordinates:

15485197 - 15486316

Intron Length:

1120

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGCAGG

5'SS Class:

major

3'SS Sequence:

ATATTTTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTAAT

U12 Branch Point Sequence:

TAATTCTTAAAA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.1

0.66

1.1

63.6

48.1

Major BPS

86.7

0.91

0.7

84.2

21.8

Major PPT

87.1

0.83

0.8

85.3

34.4

Minor 5ss

37.4

-1.4

3.1

48.3

47.5

Minor BPS

71.3

0.67

1.3

74.79

35.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029856

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030537

15483363 - 15487198

3836