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Intron Name: Anas_platyrhynchos_platyrhynchos_7_1548592_1549485_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1548592 - 1549485

Intron Length:

894

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGTGTAT

5'SS Class:

major

3'SS Sequence:

ATTATTTTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTAAT

U12 Branch Point Sequence:

TAATTATTAATT

Flanking Amino Acid:

VLELPPPTLEGIETDQTDLR

Intron Amino Acid Position:

873

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.6

0.51

1.1

68.5

38.9

Major BPS

91.8

1.04

0.7

90.2

19.3

Major PPT

86.3

0.82

0.8

80.5

36.4

Minor 5ss

37.1

-1.5

3.6

55.1

49.2

Minor BPS

0.58

1.5

79.1

36.6

Associated Gene:

Gene:

GTF3C3

Ensembl Gene ID:

ENSAPLG00000016020

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016753

1527231 - 1551604

24374