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Intron Name: Anas_platyrhynchos_platyrhynchos_7_15488461_15488534_F

Intron Information:

Intron Rank:

134368

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

15488461 - 15488534

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGTAAC

5'SS Class:

strong_major

3'SS Sequence:

CCTTGGATAAAAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ATTTTAG

U12 Branch Point Sequence:

TTTGTGTTAGTT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.2

0.88

0.9

84.2

26.3

Major BPS

63.7

0.34

1.5

63.4

Major PPT

53.3

0.07

1.2

52.8

39.6

Minor 5ss

37.7

-1.4

2.7

46.1

36.1

Minor BPS

48.5

-0

2.3

74.74

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022226

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019861

15488411 - 15490757

2347