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Intron Name: Anas_platyrhynchos_platyrhynchos_7_15488678_15488863_F

Intron Information:

Intron Rank:

134369

Intron Class:

major

Intron Phase:

Intron Coordinates:

15488678 - 15488863

Intron Length:

186

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGTCTG

5'SS Class:

strong_major

3'SS Sequence:

CTTGTGTCTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACCTTAC

U12 Branch Point Sequence:

GAGACCTTACCC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.9

0.87

0.9

74.5

41.9

Major BPS

60.1

0.25

51.3

35.1

Major PPT

80.3

0.68

0.9

37.3

Minor 5ss

-1.4

47.2

42.5

Minor BPS

55.6

0.16

1.7

61.3

43.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022226

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030867

15488371 - 15490757

2387

ENSAPLT00000029343

15488371 - 15490757

2387

ENSAPLT00000019861

15488411 - 15490757

2347

ENSAPLT00000040181

15487674 - 15489114

1441