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Intron Name: Anas_platyrhynchos_platyrhynchos_7_15489071_15490334_F

Intron Information:

Intron Rank:

134370

Intron Class:

major

Intron Phase:

Intron Coordinates:

15489071 - 15490334

Intron Length:

1264

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATGTGCT

5'SS Class:

strong_major

3'SS Sequence:

TCATATTTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTCAT

U12 Branch Point Sequence:

TTATTCATATTT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.4

0.91

0.8

80.6

31.9

Major BPS

92.2

1.05

0.7

91.9

19.6

Major PPT

82.2

0.72

0.9

76.7

36.8

Minor 5ss

41.4

-1

3.1

45.7

Minor BPS

55.2

0.24

1.8

77.34

39.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022226

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029343

15488371 - 15490757

2387

ENSAPLT00000019861

15488411 - 15490757

2347