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Intron Name: Anas_platyrhynchos_platyrhynchos_7_15489071_15490743_F

Intron Information:

Intron Rank:

134376

Intron Class:

major

Intron Phase:

Intron Coordinates:

15489071 - 15490743

Intron Length:

1673

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATGTGCT

5'SS Class:

strong_major

3'SS Sequence:

TTTGGTCCTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTATGAT

U12 Branch Point Sequence:

TGAAATATAAGT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.4

0.91

0.8

80.6

31.9

Major BPS

66.9

0.42

1.3

59.7

46.7

Major PPT

77.2

0.61

0.8

74.6

36.4

Minor 5ss

41.4

-1

3.1

45.7

Minor BPS

43.5

-0.4

60.57

42.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022226

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030867

15488371 - 15490757

2387