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Intron Name: Anas_platyrhynchos_platyrhynchos_7_1555343_1556757_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1555343 - 1556757

Intron Length:

1415

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAGTGG

5'SS Class:

major

3'SS Sequence:

CTGCCTTCCCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

TTCTAATTACCA

Flanking Amino Acid:

RVHLLENEHQMTNNLKEAQH

Intron Amino Acid Position:

304

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.3

0.67

63.7

43.1

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

69.1

0.43

0.8

61.6

34.9

Minor 5ss

35.5

-1.6

3.3

46.8

48.5

Minor BPS

50.6

0.01

2.1

69.45

42.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000015999

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016696

1555073 - 1561538

6466