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Intron Name: Anas_platyrhynchos_platyrhynchos_7_1559378_1560557_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

1559378 - 1560557

Intron Length:

1180

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

TCA|GCAACTGCA

5'SS Class:

weak_major

3'SS Sequence:

TCTAAGGTACTAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTCTAAG

U12 Branch Point Sequence:

TGTTACTGCACA

Flanking Amino Acid:

TELGHKDTEIKVARMDKKTL

Intron Amino Acid Position:

130

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

55.5

0.13

1.4

63.4

39.9

Major BPS

70.6

0.51

1.5

77.9

34.9

Major PPT

56.3

0.14

1.1

47.6

44.5

Minor 5ss

30.4

-2.2

4.1

46.6

42.9

Minor BPS

50.4

0.01

2.1

70.45

41.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000015999

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016696

1555073 - 1561538

6466