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Intron Name: Anas_platyrhynchos_platyrhynchos_7_1560709_1561163_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

1560709 - 1561163

Intron Length:

455

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACA|GTTAATTTC

5'SS Class:

weak_major

3'SS Sequence:

TCTTGTACTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTAAT

U12 Branch Point Sequence:

TTCCTGTTAATT

Flanking Amino Acid:

DNHDIQFIKTMANLQRQLEA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

56.5

0.15

1.2

61.7

37.8

Major BPS

84.4

0.85

34.5

Major PPT

80.1

0.68

0.9

74.1

35.3

Minor 5ss

42.7

-0.8

2.9

59.6

38.9

Minor BPS

56.5

0.28

2.1

76.4

40.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000015999

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016696

1555073 - 1561538

6466