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Intron Name: Anas_platyrhynchos_platyrhynchos_7_1561448_1561507_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

1561448 - 1561507

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTTCTTGGC

5'SS Class:

weak_major

3'SS Sequence:

GGCTCAAAAGAAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CCATAAT

U12 Branch Point Sequence:

CCGACCATAATG

Flanking Amino Acid:

MAPKRKKSPAKVIESNLRAY

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

51.7

0.04

1.2

49.4

Major BPS

62.9

0.32

1.2

63.9

38.4

Major PPT

46.3

-0.2

1.1

40.2

36.4

Minor 5ss

30.1

-2.3

3.2

36.1

34.5

Minor BPS

48.1

-0.2

1.8

48.52

45.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000015999

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016696

1555073 - 1561538

6466