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Intron Name: Anas_platyrhynchos_platyrhynchos_7_15665142_15680086_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

15665142 - 15680086

Intron Length:

14945

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAGGTGAC

5'SS Class:

strong_major

3'SS Sequence:

TTTCCTTTTCCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GACACAT

U12 Branch Point Sequence:

AAGAGAATGACA

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.9

0.85

0.9

75.8

34.3

Major BPS

52.1

0.05

1.2

37.5

Major PPT

91.4

0.93

0.6

84.4

30.5

Minor 5ss

31.6

-2.1

3.4

42.4

45.1

Minor BPS

-0.9

2.1

44.58

37.1

Associated Gene:

Gene:

GYPC

Ensembl Gene ID:

ENSAPLG00000013213

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023748

15635695 - 15680420

44726

ENSAPLT00000046604

15635695 - 15680420

44726