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Intron Name: Anas_platyrhynchos_platyrhynchos_7_15680192_15680373_R


Intron Information:

Intron Rank:
1

Intron Class:
major

Intron Phase:
5UTR

Intron Coordinates:
15680192 - 15680373

Intron Length:
182

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
TCT|GTAAGTTTT

5'SS Class:
major

3'SS Sequence:
TTCTAATTTCTAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTCTAAT

U12 Branch Point Sequence:
GCTCTTCTAATT

Flanking Amino Acid:
5UTR

Intron Amino Acid Position:
5UTR

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
77.9
0.66
1.1
81.2
33.5

Major BPS
94.5
1.11
0.6
92.2
14.6

Major PPT
78.2
0.63
0.8
70.2
40.1

Minor 5ss
49
-0.1
2.8
77.2
37.5

Minor BPS
49.8
0.06
1.6
66.06
39.1

Associated Gene:

Gene:
GYPC

Ensembl Gene ID:

Chromosome:
7

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

15635695 - 15680420
44726