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Intron Name: Anas_platyrhynchos_platyrhynchos_7_15924114_15927331_F

Intron Information:

Intron Rank:

132650

Intron Class:

major

Intron Phase:

Intron Coordinates:

15924114 - 15927331

Intron Length:

3218

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTA|GTAAGTATT

5'SS Class:

strong_major

3'SS Sequence:

TGTGGCTTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GAATAAT

U12 Branch Point Sequence:

CTTCTCTGAATA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.9

0.75

0.9

86.4

28.9

Major BPS

62.3

0.31

1.3

64.3

39.7

Major PPT

76.7

0.6

69.4

41.7

Minor 5ss

43.5

-0.7

2.9

62.1

37.1

Minor BPS

61.2

0.35

1.4

69.18

37.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021283

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042362

15864444 - 15927589

63146