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PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_7_15949002_15959103_F

Intron Information:

Intron Rank:
132645
Intron Class:
major
Intron Phase:
Intron Coordinates:
15949002 - 15959103
Intron Length:
10102

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
TAG|GTAAGAACA
5'SS Class:
strong_major
3'SS Sequence:
AAATTTCTTTTAG|T
3'SS Class:
major_PPT
U2 Branch Point Sequence:
TTCAAAT
U12 Branch Point Sequence:
ATTTTCCAAATT
Flanking Amino Acid:
Intron Amino Acid Position:

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
92.2
0.99
0.8
83.4
27.8
Major BPS
77.3
0.68
1
81.5
27
Major PPT
73.9
0.54
0.9
71.1
39.7
Minor 5ss
33.8
-1.9
2.9
41.4
44.7
Minor BPS
54.7
0.23
2
78.43
38.2

Associated Gene:

Gene:
Ensembl Gene ID:
ENSAPLG00000021283
Chromosome:
7

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000031316
15928046 - 15960019
31974
ENSAPLT00000027961
15923034 - 15960019
36986