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Intron Name: Anas_platyrhynchos_platyrhynchos_7_16068244_16069587_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16068244 - 16069587

Intron Length:

1344

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGTCAT

5'SS Class:

strong_major

3'SS Sequence:

TGTCTTCTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTTAATGAACT

Flanking Amino Acid:

NRDGRELIIQVDQVLKLKHN

Intron Amino Acid Position:

1003

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.89

0.9

79.7

35.4

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

85.4

0.8

77.2

37.1

Minor 5ss

-0.9

2.9

58.1

46.5

Minor BPS

0.49

1.9

87.84

36.4

Associated Gene:

Gene:

CNTNAP5

Ensembl Gene ID:

ENSAPLG00000013229

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037460

16051288 - 16447263

395976

ENSAPLT00000031140

16051288 - 16328713

277426

ENSAPLT00000013815

16051288 - 16246317

195030

ENSAPLT00000046509

16064266 - 16328713

264448

ENSAPLT00000046002

16051288 - 16328713

277426