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Intron Name: Anas_platyrhynchos_platyrhynchos_7_16176049_16187509_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16176049 - 16187509

Intron Length:

11461

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGAGAC

5'SS Class:

strong_major

3'SS Sequence:

TTATTATTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTTATTATTT

Flanking Amino Acid:

KRRKPQIYTVGNVTFSCSEP

Intron Amino Acid Position:

241

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.78

0.9

71.3

32.5

Major BPS

96.5

1.15

0.6

34.2

Major PPT

86.5

0.82

0.8

81.6

34.7

Minor 5ss

30.9

-2.2

3.4

38.5

41.1

Minor BPS

62.5

0.47

1.8

84.55

36.3

Associated Gene:

Gene:

CNTNAP5

Ensembl Gene ID:

ENSAPLG00000013229

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037460

16051288 - 16447263

395976

ENSAPLT00000031140

16051288 - 16328713

277426

ENSAPLT00000013815

16051288 - 16246317

195030

ENSAPLT00000046509

16064266 - 16328713

264448

ENSAPLT00000046002

16051288 - 16328713

277426