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Intron Name: Anas_platyrhynchos_platyrhynchos_7_16202023_16246278_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16202023 - 16246278

Intron Length:

44256

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGAAGG

5'SS Class:

strong_major

3'SS Sequence:

TCTGTTGTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTGAA

U12 Branch Point Sequence:

CAGTGCTCACCA

Flanking Amino Acid:

LNSLVLLNDQVFTGNSNADS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.8

0.75

68.1

42.8

Major BPS

82.1

0.8

71.6

36.4

Major PPT

0.7

0.9

72.6

42.4

Minor 5ss

-1.2

2.8

46.8

Minor BPS

43.6

-0.4

2.2

52.25

45.7

Associated Gene:

Gene:

CNTNAP5

Ensembl Gene ID:

ENSAPLG00000013229

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013815

16051288 - 16246317

195030