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Intron Name: Anas_platyrhynchos_platyrhynchos_7_16254627_16328218_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16254627 - 16328218

Intron Length:

73592

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACT|GTGAGTAGC

5'SS Class:

major

3'SS Sequence:

TTGCTCTTTTTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATGTGAT

U12 Branch Point Sequence:

TCTCTATGTATT

Flanking Amino Acid:

FWHLGLTATNYNCDDALVSA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.3

0.48

1.1

65.6

40.2

Major BPS

72.4

0.56

1.2

63.1

44.4

Major PPT

82.4

0.73

0.8

81.3

30.7

Minor 5ss

33.5

-1.9

2.8

46.7

41.7

Minor BPS

43.7

-0.4

1.9

62.81

41.6

Associated Gene:

Gene:

CNTNAP5

Ensembl Gene ID:

ENSAPLG00000013229

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046002

16051288 - 16328713

277426

ENSAPLT00000037460

16051288 - 16447263

395976

ENSAPLT00000031140

16051288 - 16328713

277426

ENSAPLT00000046509

16064266 - 16328713

264448