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Intron Name: Anas_platyrhynchos_platyrhynchos_7_16521629_16569844_F

Intron Information:

Intron Rank:

144018

Intron Class:

major

Intron Phase:

Intron Coordinates:

16521629 - 16569844

Intron Length:

48216

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTTGTGGA

5'SS Class:

major

3'SS Sequence:

TTTCCCTGTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATGTAT

U12 Branch Point Sequence:

TGACACATATGT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.3

0.57

1.2

66.2

39.4

Major BPS

63.7

0.34

1.4

63.7

43.9

Major PPT

81.3

0.7

0.9

76.8

31.7

Minor 5ss

34.5

-1.8

2.9

41.6

44.9

Minor BPS

40.2

-0.6

2.1

57.6

44.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027627

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035744

16520562 - 16569851

49290