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Intron Name: Anas_platyrhynchos_platyrhynchos_7_16572602_16573027_F

Intron Information:

Intron Rank:

144023

Intron Class:

major

Intron Phase:

Intron Coordinates:

16572602 - 16573027

Intron Length:

426

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGACAA

5'SS Class:

strong_major

3'SS Sequence:

TAACTCTCCTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAC

U12 Branch Point Sequence:

TATTTTCTAACT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.9

0.85

0.8

33.3

Major BPS

84.6

0.86

0.8

83.9

22.3

Major PPT

72.9

0.52

0.9

70.1

35.9

Minor 5ss

25.8

-2.8

2.9

29.5

43.2

Minor BPS

68.2

0.65

1.6

85.44

34.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027627

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045903

16566152 - 16573759

7608