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Intron Name: Anas_platyrhynchos_platyrhynchos_7_1667893_1678880_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1667893 - 1678880

Intron Length:

10988

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTGAGTACA

5'SS Class:

strong_major

3'SS Sequence:

TTTTGTTTTCTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTAAT

U12 Branch Point Sequence:

TTTAATGTGATT

Flanking Amino Acid:

RIEPGPYFMESEIKICFKYY

Intron Amino Acid Position:

134

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.8

0.73

78.8

29.6

Major BPS

90.7

1.01

0.7

19.9

Major PPT

87.7

0.85

0.7

81.2

36.5

Minor 5ss

-1.9

2.7

39.4

38.9

Minor BPS

46.7

-0.1

2.2

72.21

39.2

Associated Gene:

Gene:

HECW2

Ensembl Gene ID:

ENSAPLG00000015383

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032573

1636216 - 1741852

105637

ENSAPLT00000016094

1636265 - 1797462

161198