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Intron Name: Anas_platyrhynchos_platyrhynchos_7_16712219_16713822_R

Intron Information:

Intron Rank:

139892

Intron Class:

major

Intron Phase:

Intron Coordinates:

16712219 - 16713822

Intron Length:

1604

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGGATT

5'SS Class:

strong_major

3'SS Sequence:

ATTGGCTTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TATTGCTTAAAT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.4

0.93

0.8

87.7

Major BPS

96.5

1.15

0.6

34.2

Major PPT

77.3

0.61

0.9

69.9

40.9

Minor 5ss

32.8

-2

3.3

47.8

47.9

Minor BPS

69.7

0.7

1.9

86.76

38.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022664

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032656

16698809 - 16713842

15034