Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_7_16755900_16835793_R

Intron Information:

Intron Rank:

153671

Intron Class:

major

Intron Phase:

Intron Coordinates:

16755900 - 16835793

Intron Length:

79894

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTAAGCATC

5'SS Class:

major

3'SS Sequence:

ATCAATTCTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

TTTTGATCAATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.8

0.7

78.2

36.4

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

73.1

0.52

0.9

65.4

40.2

Minor 5ss

46.4

-0.4

2.9

65.7

38.6

Minor BPS

53.4

0.18

2.2

81.49

40.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030165

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043670

16750834 - 16844223

93390