Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_7_16767754_16768107_F

Intron Information:

Intron Rank:

150629

Intron Class:

major

Intron Phase:

Intron Coordinates:

16767754 - 16768107

Intron Length:

354

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTCAAAGAC

5'SS Class:

major

3'SS Sequence:

CAATAAATTTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTCAA

U12 Branch Point Sequence:

AAGTACTTAACC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

66.5

0.39

1.3

62.8

36.2

Major BPS

0.82

0.8

83.9

25.3

Major PPT

65.6

0.35

44.3

Minor 5ss

25.5

-2.8

3.2

32.7

42.3

Minor BPS

68.6

0.56

1.5

71.44

39.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030927

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028180

16713656 - 16771009

57354