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Intron Name: Anas_platyrhynchos_platyrhynchos_7_16767754_16770785_F

Intron Information:

Intron Rank:

150633

Intron Class:

major

Intron Phase:

Intron Coordinates:

16767754 - 16770785

Intron Length:

3032

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTCAAAGAC

5'SS Class:

major

3'SS Sequence:

CTCTTGTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

ATTTTTTTAAAA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

66.5

0.39

1.3

62.8

36.2

Major BPS

90.4

0.7

90.2

19.3

Major PPT

84.9

0.78

0.8

79.6

32.4

Minor 5ss

25.5

-2.8

3.2

32.7

42.3

Minor BPS

72.4

0.7

1.2

78.49

31.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030927

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047269

16713656 - 16771009

57354