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Intron Name: Anas_platyrhynchos_platyrhynchos_7_1678976_1682872_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1678976 - 1682872

Intron Length:

3897

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGTTTA

5'SS Class:

strong_major

3'SS Sequence:

TTCTCCTCTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATGTTAT

U12 Branch Point Sequence:

GGCATGTTATTT

Flanking Amino Acid:

CITVKNPAVMMGVEGTDEGA

Intron Amino Acid Position:

166

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.4

0.95

0.8

85.9

25.4

Major BPS

72.5

0.56

1.2

63.4

Major PPT

86.9

0.83

0.6

84.9

22.7

Minor 5ss

43.9

-0.7

2.8

43.6

Minor BPS

41.4

-0.5

2.1

53.26

42.4

Associated Gene:

Gene:

HECW2

Ensembl Gene ID:

ENSAPLG00000015383

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032573

1636216 - 1741852

105637

ENSAPLT00000016094

1636265 - 1797462

161198