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Intron Name: Anas_platyrhynchos_platyrhynchos_7_1686209_1688669_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1686209 - 1688669

Intron Length:

2461

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAATGTAT

5'SS Class:

strong_major

3'SS Sequence:

TCTTTCCTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTGAT

U12 Branch Point Sequence:

GATATATTGATA

Flanking Amino Acid:

NTTNPVWHREKYSFVALLTD

Intron Amino Acid Position:

248

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

77.6

33.1

Major BPS

88.6

0.96

0.8

77.7

37.1

Major PPT

88.9

0.88

0.7

81.1

Minor 5ss

38.5

-1.3

3.4

55.5

48.6

Minor BPS

48.5

-0.1

1.6

57.42

35.2

Associated Gene:

Gene:

HECW2

Ensembl Gene ID:

ENSAPLG00000015383

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032573

1636216 - 1741852

105637

ENSAPLT00000016094

1636265 - 1797462

161198