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Intron Name: Anas_platyrhynchos_platyrhynchos_7_1688813_1691869_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1688813 - 1691869

Intron Length:

3057

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAATTAAT

5'SS Class:

major

3'SS Sequence:

TTTGTTTTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CACTAAA

U12 Branch Point Sequence:

AAACCACTAAAG

Flanking Amino Acid:

VQRLLERHAIGDQILSYNLG

Intron Amino Acid Position:

295

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.9

0.68

79.8

35.1

Major BPS

65.2

0.38

0.9

65.5

27.9

Major PPT

92.4

0.95

0.7

88.3

28.9

Minor 5ss

-1.5

2.8

43.2

43.9

Minor BPS

42.5

-0.7

1.9

45.78

Associated Gene:

Gene:

HECW2

Ensembl Gene ID:

ENSAPLG00000015383

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032573

1636216 - 1741852

105637

ENSAPLT00000016094

1636265 - 1797462

161198