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Intron Name: Anas_platyrhynchos_platyrhynchos_7_1691971_1693027_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1691971 - 1693027

Intron Length:

1057

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGACTT

5'SS Class:

strong_major

3'SS Sequence:

TGTGTCTCTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCACAT

U12 Branch Point Sequence:

TTCACATTCAGT

Flanking Amino Acid:

KVEITSSVHEDASPETVGTL

Intron Amino Acid Position:

329

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.9

0.8

80.6

33.8

Major BPS

77.7

0.69

83.3

27.7

Major PPT

80.1

0.68

0.9

73.8

36.9

Minor 5ss

32.5

-2

3.3

47.4

Minor BPS

46.3

-0.2

2.3

69.55

46.9

Associated Gene:

Gene:

HECW2

Ensembl Gene ID:

ENSAPLG00000015383

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032573

1636216 - 1741852

105637

ENSAPLT00000016094

1636265 - 1797462

161198