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Intron Name: Anas_platyrhynchos_platyrhynchos_7_16945581_16947931_R

Intron Information:

Intron Rank:

137662

Intron Class:

major

Intron Phase:

Intron Coordinates:

16945581 - 16947931

Intron Length:

2351

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGATGG

5'SS Class:

strong_major

3'SS Sequence:

ATCATTTGATCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

CACCTTTTAACT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.1

0.92

0.9

72.5

39.9

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

67.1

0.39

1.1

66.6

43.3

Minor 5ss

37.3

-1.4

47.6

47.9

Minor BPS

62.5

0.47

1.3

69.58

41.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021566

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028755

16944513 - 16948037

3525