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Intron Name: Anas_platyrhynchos_platyrhynchos_7_1699356_1700733_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1699356 - 1700733

Intron Length:

1378

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAAAAA

5'SS Class:

strong_major

3'SS Sequence:

ACTTTGCTTTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAATGAT

U12 Branch Point Sequence:

ATGTCATTCACT

Flanking Amino Acid:

EETDFHHSNADFRRENVLPH

Intron Amino Acid Position:

891

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.5

0.79

0.9

79.3

28.7

Major BPS

76.8

0.67

40.9

Major PPT

76.9

0.61

0.8

36.1

Minor 5ss

32.1

-2

39.7

45.8

Minor BPS

58.9

0.36

2.1

79.61

42.2

Associated Gene:

Gene:

HECW2

Ensembl Gene ID:

ENSAPLG00000015383

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032573

1636216 - 1741852

105637

ENSAPLT00000016094

1636265 - 1797462

161198