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Intron Name: Anas_platyrhynchos_platyrhynchos_7_1700859_1702351_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1700859 - 1702351

Intron Length:

1493

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCT|GTGAGTATA

5'SS Class:

major

3'SS Sequence:

ATGTGTTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTAAT

U12 Branch Point Sequence:

TCTTTCAAAATT

Flanking Amino Acid:

EFFTVLHSNPSAYRMFTNNT

Intron Amino Acid Position:

933

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.5

0.55

1.1

76.5

Major BPS

84.4

0.85

34.5

Major PPT

80.5

0.69

0.9

77.4

41.2

Minor 5ss

36.8

-1.5

2.9

52.2

44.4

Minor BPS

53.8

0.2

1.9

75.84

41.6

Associated Gene:

Gene:

HECW2

Ensembl Gene ID:

ENSAPLG00000015383

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016094

1636265 - 1797462

161198

ENSAPLT00000032573

1636216 - 1741852

105637