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Intron Name: Anas_platyrhynchos_platyrhynchos_7_1702538_1707454_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1702538 - 1707454

Intron Length:

4917

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATTGTA

5'SS Class:

strong_major

3'SS Sequence:

TTCCTTTCTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAAACAT

U12 Branch Point Sequence:

GTTGACTAAACA

Flanking Amino Acid:

WEMKHDHQGKAFFVDHNSRT

Intron Amino Acid Position:

995

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.2

0.88

0.9

83.4

28.2

Major BPS

63.2

0.33

1.1

69.6

35.7

Major PPT

83.4

0.75

0.7

77.1

31.6

Minor 5ss

36.3

-1.5

3.3

49.5

46.6

Minor BPS

53.7

0.11

69.03

43.1

Associated Gene:

Gene:

HECW2

Ensembl Gene ID:

ENSAPLG00000015383

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032573

1636216 - 1741852

105637

ENSAPLT00000016094

1636265 - 1797462

161198