Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_7_17046631_17046901_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

17046631 - 17046901

Intron Length:

271

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTTGAAAG

5'SS Class:

major

3'SS Sequence:

TTTCACATTGAAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAC

U12 Branch Point Sequence:

TGTTCTTTATTT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.5

1.2

65.4

Major BPS

90.1

0.99

0.7

91.6

20.3

Major PPT

69.3

0.43

1.1

69.1

35.6

Minor 5ss

35.3

-1.7

2.7

40.2

45.6

Minor BPS

70.4

0.72

1.5

84.38

36.8

Associated Gene:

Gene:

TMEM177

Ensembl Gene ID:

ENSAPLG00000001672

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046677

17046484 - 17048623

2140